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Nmar_0986 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0986" - PFAM: TPR repeat-containing protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0986PFAM- TPR repeat-containing protein; peptidase M10A and M12B matrixin and adamalysin; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide domain protein; KEGG- mba-Mbar_A2255 hypothetical protein (479 aa)    
Predicted Functional Partners:
Nmar_0987
Transcription initiation factor IIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) (315 aa)
              0.622
Nmar_1767
PFAM- heat shock protein DnaJ domain protein; KEGG- cfa-611441 similar to DnaJ homolog subfamily A member 1 (Heat shock 40 kDa protein 4) (DnaJ protein homolog 2) (HSJ-2) (HSDJ) (384 aa)
 
 
  0.620
Nmar_0985
annotation not available (120 aa)
              0.592
Nmar_1398
KEGG- syn-slr1056 hypothetical protein (697 aa)
 
        0.574
Nmar_0445
Uncharacterized protein; KEGG- tva-TVAG_193760 DNA-directed RNA polymerase, omega subunit family protein Pfam- DUF683 TBPIP bZIP_1 Tektin HalX PspA_IM30 Tup_N GBP_C Vicilin_N priB_priC DMPK_coil PLU-1 DUF812 Cortex-I_coil HALZ LMP UVR ATG16 Prefoldin_2 Syntaxin-6_N Myosin_tail_1 Spectrin Tropomyosin DUF904 SpoOE-like Rab5-bind Filament DUF593 HSBP1 TPR_MLP1_2 Nnf1 PROSITE- GLU_RICH LYS_RICH (509 aa)
 
 
  0.559
Nmar_0739
PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide domain protein; KEGG- mth-MTH83 O-linked GlcNAc transferase (75 aa)
   
          0.559
Nmar_0451
KEGG- sma-SAV2928 DNA repair helicase (218 aa)
   
          0.537
Nmar_0351
PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide domain protein; KEGG- mmz-MmarC7_1279 periplasmic copper-binding (553 aa)
   
          0.533
Nmar_1444
KEGG- nmu-Nmul_A2605 hypothetical protein (583 aa)
   
          0.515
Nmar_0962
KEGG- hma-pNG7298 hypothetical protein (250 aa)
   
          0.513
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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