STRINGSTRING
Nmar_1038 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1038" - PFAM: protein of unknown function DUF47 in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1038PFAM- protein of unknown function DUF47; KEGG- smr-Smar_0165 protein of unknown function DUF47 (217 aa)    
Predicted Functional Partners:
Nmar_1039
TIGRFAM- tRNA intron endonuclease; PFAM- tRNA intron endonuclease, catalytic domain protein; KEGG- hbu-Hbut_0045 general archaeal splicing enzyme (178 aa)
              0.814
lig
DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (588 aa)
              0.638
Nmar_1036
annotation not available (135 aa)
              0.547
Nmar_0217
PFAM- Radical SAM domain protein; KEGG- sto-ST1514 pyruvate formate-lyase activating enzyme (356 aa)
              0.539
fbp
Fructose-1,6-bisphosphate aldolase/phosphatase; Catalyzes two subsequent steps in gluconeogenesis- the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) (381 aa)
              0.424
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (11%) [HD]