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Nmar_1039 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1039" - TIGRFAM: tRNA intron endonuclease in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_1039TIGRFAM- tRNA intron endonuclease; PFAM- tRNA intron endonuclease, catalytic domain protein; KEGG- hbu-Hbut_0045 general archaeal splicing enzyme (178 aa)    
Predicted Functional Partners:
Nmar_1038
PFAM- protein of unknown function DUF47; KEGG- smr-Smar_0165 protein of unknown function DUF47 (217 aa)
              0.814
lig
DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (588 aa)
         
  0.710
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA; Belongs to the RNase Z family (299 aa)
     
   
  0.590
Nmar_1751
Tyrosine--tRNA ligase; TIGRFAM- tyrosyl-tRNA synthetase; PFAM- aminoacyl-tRNA synthetase class Ib; KEGG- tko-TK0568 tyrosyl-tRNA synthetase (348 aa)
     
   
  0.573
Nmar_0397
TIGRFAM- ornithine carbamoyltransferase; PFAM- aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG- pho-PH0726 ornithine carbamoyltransferase; Belongs to the ATCase/OTCase family (304 aa)
           
  0.566
Nmar_0696
PFAM- homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG- mja-MJ1602 homoserine dehydrogenase (336 aa)
           
  0.565
Nmar_1235
TIGRFAM- DNA-directed RNA polymerase; PFAM- RNA binding S1 domain protein; RNA polymerase Rpb7 domain protein; KEGG- mja-MJ0397 DNA-directed RNA polymerase subunit E’ (198 aa)
   
        0.506
Nmar_1623
PFAM- DNA-binding TFAR19-related protein; KEGG- sai-Saci_1468 hypothetical programmed cell death protein 5; Belongs to the PDCD5 family (93 aa)
   
          0.501
Nmar_0980
PFAM- GTP-binding protein HSR1-related; TGS domain protein; GTPase of unknown function domain protein; KEGG- sso-SSO0743 GTP binding protein (403 aa)
   
          0.500
Nmar_0948
PFAM- DNA polymerase B exonuclease; DNA polymerase B region; SMART- DNA-directed DNA polymerase B; KEGG- tpe-Tpen_0298 DNA polymerase B region (852 aa)
   
 
      0.472
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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