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Nmar_1040 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1040" - PFAM: Fibronectin type III domain protein in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1040PFAM- Fibronectin type III domain protein; KEGG- spu-590007 similar to titin isoform N2-A (771 aa)    
Predicted Functional Partners:
Nmar_1042
annotation not available (78 aa)
              0.691
Nmar_1041
annotation not available (125 aa)
              0.691
Nmar_1325
Uncharacterized protein; KEGG- saz-Sama_1102 AAA ATPase containing von Willebrand factor type A (vWA) domain (483 aa)
   
          0.530
Nmar_1043
PFAM- short-chain dehydrogenase/reductase SDR; KEGG- oan-Oant_1136 short-chain dehydrogenase/reductase SDR (588 aa)
   
   
  0.510
Nmar_1044
annotation not available (149 aa)
              0.497
Nmar_0682
PFAM- Collagen triple helix repeat; KEGG- bcy-Bcer98_2389 collagen triple helix repeat (542 aa)
   
          0.442
Nmar_0998
KEGG- xfa-XF1264 hypothetical protein (513 aa)
   
          0.420
Nmar_0166
PFAM- sulfotransferase; KEGG- ter-Tery_4767 sulfotransferase (295 aa)
   
          0.406
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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