STRINGSTRING
Nmar_1047 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1047" - PFAM: NHL repeat containing protein in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1047PFAM- NHL repeat containing protein; Fibronectin type III domain protein; KEGG- mac-MA2021 hypothetical protein (903 aa)    
Predicted Functional Partners:
Nmar_1325
Uncharacterized protein; KEGG- saz-Sama_1102 AAA ATPase containing von Willebrand factor type A (vWA) domain (483 aa)
   
          0.442
Nmar_1048
Probable membrane transporter protein; PFAM- protein of unknown function DUF81; KEGG- cbe-Cbei_3002 protein of unknown function DUF81 (257 aa)
              0.441
Nmar_1133
PFAM- Kelch repeat-containing protein; Kelch repeat protein; KEGG- gvi-gll3169 unknown protein (341 aa)
   
          0.400
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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