STRINGSTRING
Nmar_1084 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1084" - PFAM: metallophosphoesterase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1084PFAM- metallophosphoesterase; KEGG- rci-LRC424 predicted phosphoesterase (249 aa)    
Predicted Functional Partners:
Nmar_0088
PFAM- helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART- DEAD-like helicases; KEGG- mac-MA0762 ATP-dependent DNA helicase (913 aa)
 
          0.729
Nmar_1083
annotation not available (100 aa)
              0.648
Nmar_1604
Phosphate uptake regulator, PhoU; PFAM- SpoVT/AbrB domain protein; PhoU family protein; KEGG- mba-Mbar_A1765 hypothetical protein (348 aa)
   
          0.614
Nmar_1301
PFAM- protein of unknown function DUF120; KEGG- hwa-HQ3236A conserved riboflavin biosynthetic operon protein; probable transtriptional regulator (227 aa)
   
          0.609
priS
DNA primase small subunit PriS; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthe [...] (373 aa)
   
          0.609
priL
DNA primase large subunit PriL; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair (341 aa)
   
          0.606
Nmar_0975
PFAM- Protein of unknown function DUF650; Protein of unknown function DUF651; KEGG- pho-PH1856 hypothetical protein (385 aa)
   
          0.598
dnaG
DNA primase DnaG; SMART- Toprim sub domain protein; KEGG- sso-SSO0079 Bacterial-like DNA primase (380 aa)
   
          0.582
Nmar_1297
KEGG- mmq-MmarC5_1019 diphthine synthase; TIGRFAM- diphthine synthase; PFAM- Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (345 aa)
              0.571
Nmar_0583
PFAM- protein of unknown function DUF75; KEGG- tac-Ta1441 hypothetical protein (241 aa)
   
          0.571
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (12%) [HD]