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Nmar_1088 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1088" - PFAM: AAA ATPase central domain protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Nmar_1088PFAM- AAA ATPase central domain protein; MIT domain protein; SMART- AAA ATPase; KEGG- sai-Saci_1372 AAA family ATPase (397 aa)    
Predicted Functional Partners:
Nmar_1090
annotation not available (185 aa)
   
 
  0.896
Nmar_1089
annotation not available (166 aa)
              0.842
Nmar_0816
SNF7; KEGG- mse-Msed_1695 SNF7 (216 aa)
     
 
  0.737
Nmar_0061
KEGG- sto-ST1237 hypothetical protein (216 aa)
     
 
  0.737
Nmar_0029
KEGG- sto-ST1237 hypothetical protein (215 aa)
     
 
  0.737
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1263 aa)
   
 
  0.684
Nmar_0700
KEGG- sto-ST1213 hypothetical protein (292 aa)
         
  0.658
Nmar_1087
annotation not available (518 aa)
              0.652
Nmar_1262
PFAM- Tubulin/FtsZ GTPase; KEGG- mka-MK0821 ftsZ GTPase involved in cell division (316 aa)
     
   
  0.623
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (244 aa)
   
 
      0.568
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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