STRINGSTRING
Nmar_1092 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1092" - PFAM: Endoribonuclease L-PSP in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1092PFAM- Endoribonuclease L-PSP; KEGG- mag-amb2751 putative translation initiation inhibitor (151 aa)    
Predicted Functional Partners:
Nmar_1091
PFAM- transcriptional regulator TrmB; KEGG- neq-NEQ098 predicted transcription regulator (386 aa)
              0.745
Nmar_0848
TIGRFAM- threonine dehydratase; PFAM- Pyridoxal-5’-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG- chy-CHY_2459 threonine dehydratase (402 aa)
   
 
  0.712
Nmar_1093
PFAM- sodium-dicarboxylate symporter; KEGG- mbu-Mbur_1020 sodium--dicarboxylate symporter (425 aa)
              0.684
Nmar_1008
D-alanine--D-alanine ligase; PFAM- peptidase M20; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG- amt-Amet_3744 D-alanine--D-alanine ligase domain protein (743 aa)
   
      0.606
Nmar_1548
PFAM- UBA/THIF-type NAD/FAD binding protein; thiamineS protein; MoeZ/MoeB domain protein; KEGG- wsu-WS1006 molybdopterin biosynthesis protein MoeB (443 aa)
              0.571
Nmar_1090
annotation not available (185 aa)
              0.503
Nmar_1089
annotation not available (166 aa)
              0.503
Nmar_1088
PFAM- AAA ATPase central domain protein; MIT domain protein; SMART- AAA ATPase; KEGG- sai-Saci_1372 AAA family ATPase (397 aa)
              0.501
Nmar_1024
PFAM- heat shock protein DnaJ domain protein; KEGG- cfa-609460 DnaJ (Hsp40) homolog, subfamily B, member 8 (223 aa)
         
  0.462
Nmar_1087
annotation not available (518 aa)
              0.402
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (12%) [HD]