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Nmar_1103 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1103" - TIGRFAM: excinuclease ABC, C subunit in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_1103TIGRFAM- excinuclease ABC, C subunit; PFAM- Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG- mmp-MMP0728 excinuclease ABC subunit C (528 aa)    
Predicted Functional Partners:
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (650 aa)
 
  0.996
uvrA
UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (939 aa)
 
 
  0.991
Nmar_1106
PFAM- pyridoxamine 5’-phosphate oxidase-related FMN-binding; KEGG- sun-SUN_0949 hypothetical protein (216 aa)
              0.685
Nmar_1008
D-alanine--D-alanine ligase; PFAM- peptidase M20; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG- amt-Amet_3744 D-alanine--D-alanine ligase domain protein (743 aa)
 
     
  0.662
Nmar_1548
PFAM- UBA/THIF-type NAD/FAD binding protein; thiamineS protein; MoeZ/MoeB domain protein; KEGG- wsu-WS1006 molybdopterin biosynthesis protein MoeB (443 aa)
 
   
  0.627
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (388 aa)
   
   
  0.607
Nmar_0944
PFAM- helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases; KEGG- tko-TK1021 helicase-associated endonuclease for fork-structured DNA (502 aa)
         
  0.574
Nmar_0610
PFAM- restriction modification system DNA specificity domain; putative RNA methylase; N-6 DNA methylase; Methyltransferase type 11; KEGG- fta-FTA_1029 hypothetical protein (730 aa)
         
  0.573
top6B
Type 2 DNA topoisomerase 6 subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity (626 aa)
           
  0.569
top6A
Type 2 DNA topoisomerase 6 subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family (370 aa)
           
  0.568
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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