STRINGSTRING
Nmar_1109 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1109" - PFAM: luciferase family protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1109PFAM- luciferase family protein; KEGG- afu-AF2411 hypothetical protein (368 aa)    
Predicted Functional Partners:
Nmar_1108
annotation not available (79 aa)
              0.685
Nmar_1110
PFAM- iron-containing alcohol dehydrogenase; KEGG- cdf-CD1907 putative ethanolamine/propanediol utilization propanol dehydrogenase (314 aa)
 
          0.651
cobS
Adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate; Belongs to the CobS family (241 aa)
   
     
  0.618
Nmar_0419
KEGG- mhu-Mhun_0020 uncharacterised conserved protein UCP005026 (259 aa)
 
     
  0.562
Nmar_0667
TIGRFAM- F420-dependent oxidoreductase, putative; PFAM- protein of unknown function DUF129; KEGG- rrs-RoseRS_1136 F420-dependent oxidoreductase, putative (241 aa)
 
     
  0.560
Nmar_0626
TIGRFAM- LPPG domain containing protein; PFAM- protein of unknown function UPF0052 and CofD; KEGG- rrs-RoseRS_1138 LPPG domain containing protein (319 aa)
 
     
  0.548
Nmar_0701
TIGRFAM- acetate--CoA ligase; PFAM- AMP-dependent synthetase and ligase; KEGG- deb-DehaBAV1_1019 acetate--CoA ligase (638 aa)
           
  0.545
Nmar_1111
Hydroxypyruvate reductase; PFAM- MOFRL domain protein; KEGG- pfu-PF0024 putative glycerate kinase (425 aa)
              0.438
Nmar_1285
TIGRFAM- aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG- aba-Acid345_0825 ABC transporter, substrate-binding protein, aliphatic sulphonates (341 aa)
   
 
  0.435
Nmar_1737
PFAM- NADPH-dependent FMN reductase; KEGG- oih-OB0356 NADH-dependent FMN reductase (174 aa)
   
 
  0.425
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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