STRINGSTRING
Nmar_1113 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1113" - KEGG: rci:RCIX2327 hypothetical protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1113KEGG- rci-RCIX2327 hypothetical protein (321 aa)    
Predicted Functional Partners:
lig
DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (588 aa)
 
  0.962
Nmar_1114
TIGRFAM- phosphoribosylglycinamide formyltransferase; PFAM- formyl transferase domain protein; KEGG- gme-Gmet_1845 phosphoribosylglycinamide formyltransferase (191 aa)
              0.592
Nmar_0088
PFAM- helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART- DEAD-like helicases; KEGG- mac-MA0762 ATP-dependent DNA helicase (913 aa)
 
          0.474
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (227 aa)
 
   
  0.423
Nmar_1472
annotation not available (821 aa)
   
        0.415
Nmar_1003
PFAM- N-formylglutamate amidohydrolase; KEGG- mem-Memar_1317 N-formylglutamate amidohydrolase (259 aa)
   
          0.411
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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