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Nmar_1198 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1198" - PFAM: tRNA pseudouridine synthase D TruD in Nitrosopumilus maritimus
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second shell of interactors
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_1198PFAM- tRNA pseudouridine synthase D TruD; KEGG- pis-Pisl_0511 pseudouridylate synthase (398 aa)    
Predicted Functional Partners:
Nmar_1199
KEGG- cbe-Cbei_3614 hypothetical protein (533 aa)
 
          0.881
Nmar_1200
Aminoacyl-tRNA hydrolase; PFAM- protein of unknown function UPF0099; KEGG- sso-SSO0175 peptidyl-tRNA hydrolase (124 aa)
 
          0.875
truB
Probable tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (332 aa)
   
 
  0.839
pus10
tRNA pseudouridine synthase Pus10; Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs (381 aa)
   
   
  0.801
cysS
Cysteine--tRNA ligase; KEGG- tte-TTE2315 cysteinyl-tRNA synthetase; TIGRFAM- cysteinyl-tRNA synthetase; PFAM- Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia (462 aa)
     
   
  0.768
leuS
Leucine--tRNA ligase; TIGRFAM- leucyl-tRNA synthetase; KEGG- mba-Mbar_A2048 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (955 aa)
   
   
  0.768
thrS
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr); Belongs to the class-II aminoacyl-tRNA synthetase family (621 aa)
   
   
  0.733
nop10
Ribosome biogenesis protein Nop10; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA (51 aa)
     
   
  0.701
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C’/D’ sRNAs (128 aa)
 
 
  0.696
Nmar_1477
Aminoacyl-tRNA synthetase class Ia; KEGG- iho-Igni_0220 valyl-tRNA synthetase (771 aa)
     
   
  0.687
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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