STRINGSTRING
Nmar_1224 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1224" - annotation not available in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1224annotation not available (98 aa)    
Predicted Functional Partners:
ef1b
Elongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA (93 aa)
              0.912
Nmar_1221
KEGG- tpe-Tpen_0662 protein of unknown function DUF1610 (42 aa)
              0.912
Nmar_1223
AAA family ATPase, CDC48 subfamily; KEGG- hbu-Hbut_1358 ATP-dependent protease; TIGRFAM- AAA family ATPase, CDC48 subfamily; PFAM- AAA ATPase VAT domain protein; AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; ATPase associated with various cellular activities AAA_5; SMART- AAA ATPase (721 aa)
              0.859
Nmar_1220
Dehydrogenase (Flavoprotein)-like protein; KEGG- mja-MJ1520 bacteriochlorophyll synthase 43 kDa subunit (ChlP) (378 aa)
              0.552
fen
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] (340 aa)
              0.539
Nmar_1198
PFAM- tRNA pseudouridine synthase D TruD; KEGG- pis-Pisl_0511 pseudouridylate synthase (398 aa)
              0.504
Nmar_1200
Aminoacyl-tRNA hydrolase; PFAM- protein of unknown function UPF0099; KEGG- sso-SSO0175 peptidyl-tRNA hydrolase (124 aa)
              0.491
Nmar_0812
PFAM- Protein of unknown function DUF371; KEGG- mae-Maeo_0133 protein of unknown function DUF371 (138 aa)
              0.410
Nmar_1219
PFAM- integrase family protein; KEGG- deb-DehaBAV1_0056 phage integrase family protein (351 aa)
              0.408
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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