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mre11 protein (Nitrosopumilus maritimus) - STRING interaction network
"mre11" - DNA double-strand break repair protein Mre11 in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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mre11DNA double-strand break repair protein Mre11; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3’-5’ exonuclease activity and single- stranded endonuclease activity; Belongs to the MRE11/RAD32 family (380 aa)    
Predicted Functional Partners:
Nmar_1245
PFAM- SMC domain protein; KEGG- sto-ST2108 hypothetical purine NTPase (693 aa)
 
 
  0.986
Nmar_1243
PFAM- protein of unknown function DUF87; KEGG- sso-SSO2251 hypothetical protein (510 aa)
 
     
  0.943
Nmar_1242
KEGG- sto-ST2109 hypothetical protein (278 aa)
         
  0.894
Nmar_1213
PFAM- SMC domain protein; KEGG- mth-MTH540 intracellular protein transport protein (806 aa)
 
 
  0.850
Nmar_1246
annotation not available (171 aa)
              0.638
Nmar_1241
annotation not available (317 aa)
              0.638
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1263 aa)
     
 
  0.624
rpl37ae
50S ribosomal protein L37Ae; Binds to the 23S rRNA (70 aa)
           
  0.566
rpl24e
50S ribosomal protein L24e; Binds to the 23S rRNA (66 aa)
           
  0.566
Nmar_1247
Histidine kinase; PFAM- ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG- drm-Dred_1511 integral membrane sensor signal transduction histidine kinase (546 aa)
     
      0.545
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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