STRINGSTRING
Nmar_1276 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1276" - KEGG: hma:rrnB0052 regulatory protein in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1276KEGG- hma-rrnB0052 regulatory protein (185 aa)    
Predicted Functional Partners:
Nmar_1277
KEGG- rba-RB4919 hypothetical protein-signal peptide prediction (150 aa)
              0.655
Nmar_1275
PFAM- Rhodanese domain protein; KEGG- mkm-Mkms_5751 beta-lactamase domain protein (257 aa)
              0.611
Nmar_1556
PFAM- Haloacid dehalogenase domain protein hydrolase; KEGG- nph-NP0770A hypothetical protein (306 aa)
 
          0.574
Nmar_0238
PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG- tac-Ta1448m ferredoxin (163 aa)
   
          0.548
Nmar_0239
PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG- tvo-TVN0119 ferredoxin (178 aa)
   
          0.540
Nmar_1324
PFAM- integrase family protein; KEGG- mac-MA3794 integrase (423 aa)
   
          0.537
Nmar_1509
PFAM- phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG- mbu-Mbur_1505 phosphoesterase, RecJ-like protein (473 aa)
   
          0.531
Nmar_0715
PFAM- Mov34/MPN/PAD-1 family protein; KEGG- mth-MTH971 hypothetical protein (133 aa)
   
          0.527
Nmar_0705
PFAM- transcriptional regulator TrmB; KEGG- neq-NEQ098 predicted transcription regulator (283 aa)
   
          0.518
polC
DNA polymerase II large subunit; Possesses two activities- a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3’- to 5’-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase (1125 aa)
   
          0.515
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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