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Nmar_1324 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1324" - PFAM: integrase family protein in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1324PFAM- integrase family protein; KEGG- mac-MA3794 integrase (423 aa)    
Predicted Functional Partners:
Nmar_1281
Transcriptional regulator, ArsR family; PFAM- regulatory protein ArsR; KEGG- mem-Memar_2162 regulatory protein, ArsR (154 aa)
   
          0.601
Nmar_1326
PFAM- regulatory protein ArsR; transcriptional regulator TrmB; KEGG- mba-Mbar_A2012 regulatory protein (171 aa)
   
          0.593
Nmar_0610
PFAM- restriction modification system DNA specificity domain; putative RNA methylase; N-6 DNA methylase; Methyltransferase type 11; KEGG- fta-FTA_1029 hypothetical protein (730 aa)
   
   
  0.586
Nmar_1645
Transcriptional regulator, ArsR family; PFAM- regulatory protein ArsR; KEGG- nph-NP3936A hypothetical protein (166 aa)
   
          0.581
Nmar_1604
Phosphate uptake regulator, PhoU; PFAM- SpoVT/AbrB domain protein; PhoU family protein; KEGG- mba-Mbar_A1765 hypothetical protein (348 aa)
   
          0.538
Nmar_1276
KEGG- hma-rrnB0052 regulatory protein (185 aa)
   
          0.537
priL
DNA primase large subunit PriL; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair (341 aa)
   
          0.503
Nmar_1717
Phosphate uptake regulator, PhoU; PFAM- SpoVT/AbrB domain protein; PhoU family protein; KEGG- rci-RCIX2746 phosphate uptake regulator (PhoU family) (326 aa)
   
          0.502
Nmar_1301
PFAM- protein of unknown function DUF120; KEGG- hwa-HQ3236A conserved riboflavin biosynthetic operon protein; probable transtriptional regulator (227 aa)
   
          0.496
Nmar_0952
Transcriptional regulator, XRE family; PFAM- CBS domain containing protein; helix-turn-helix domain protein; KEGG- pto-PTO1105 transcriptional regulatory protein (185 aa)
 
          0.490
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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