STRINGSTRING
Nmar_1345 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1345" - TIGRFAM: 2,4-diaminobutyrate 4-transaminase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1345TIGRFAM- 2,4-diaminobutyrate 4-transaminase; diaminobutyrate--2-oxoglutarate aminotransferase; PFAM- aminotransferase class-III; KEGG- mmw-Mmwyl1_1159 diaminobutyrate--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (431 aa)    
Predicted Functional Partners:
Nmar_1346
TIGRFAM- L-2,4-diaminobutyric acid acetyltransferase; PFAM- GCN5-related N-acetyltransferase; KEGG- bha-BH0920 diaminobutyric acid acetyltransferase (167 aa)
   
    0.997
Nmar_1344
PFAM- Ectoine synthase; Cupin 2 conserved barrel domain protein; KEGG- hch-HCH_01508 uncharacterized conserved protein, contains double-stranded beta-helix domain (128 aa)
 
     
  0.979
Nmar_1343
TIGRFAM- ectoine hydroxylase; PFAM- Phytanoyl-CoA dioxygenase; KEGG- noc-Noc_1560 phytanoyl-CoA dioxygenase (304 aa)
 
   
  0.966
Nmar_1586
KEGG- mxa-MXAN_3050 aspartate-semialdehyde dehydrogenase; TIGRFAM- aspartate-semialdehyde dehydrogenase; PFAM- Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region (358 aa)
       
  0.926
Nmar_0696
PFAM- homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG- mja-MJ1602 homoserine dehydrogenase (336 aa)
         
  0.900
Nmar_1347
annotation not available (125 aa)
              0.845
Nmar_1008
D-alanine--D-alanine ligase; PFAM- peptidase M20; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG- amt-Amet_3744 D-alanine--D-alanine ligase domain protein (743 aa)
   
 
  0.811
Nmar_1342
annotation not available (165 aa)
              0.774
Nmar_1754
Aspartokinase; KEGG- mka-MK0109 aspartokinase; TIGRFAM- aspartate kinase; aspartate kinase, monofunctional class; PFAM- aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family (467 aa)
         
  0.706
Nmar_1608
PFAM- aldehyde dehydrogenase; KEGG- mbu-Mbur_0175 succinate-semialdehyde dehydrogenase (NAD(P)+) (443 aa)
 
 
  0.664
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (17%) [HD]