STRINGSTRING
Nmar_1381 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1381" - PFAM: ribosomal RNA adenine methylase transferase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1381PFAM- ribosomal RNA adenine methylase transferase; KEGG- tpt-Tpet_1357 dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (234 aa)    
Predicted Functional Partners:
rpl21e
PFAM- Ribosomal protein L21e; KEGG- hbu-Hbut_1660 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family (99 aa)
   
   
  0.969
Nmar_1380
TIGRFAM- putative methylase; PFAM- methyltransferase small; KEGG- msi-Msm_1373 methyltransferase, HemK (178 aa)
   
   
  0.949
Nmar_1409
PFAM- KH type 1 domain protein; SMART- KH domain protein; KEGG- mka-MK0513 predicted RNA-binding protein containing KH domain) (190 aa)
   
 
  0.945
Nmar_1382
PFAM- Protein of unknown function DUF655; KEGG- tac-Ta1299 putative nucleotide binding protein (188 aa)
         
  0.942
truB
Probable tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (332 aa)
 
 
  0.912
Nmar_1383
PFAM- RNA polymerase Rpb4; KEGG- tpe-Tpen_0352 RNA polymerase Rpb4 (108 aa)
         
  0.906
leuS
Leucine--tRNA ligase; TIGRFAM- leucyl-tRNA synthetase; KEGG- mba-Mbar_A2048 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (955 aa)
 
 
  0.864
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (513 aa)
 
   
  0.857
Nmar_1391
PFAM- Pre-mRNA processing ribonucleoprotein, binding domain protein; NOSIC domain protein; KEGG- smr-Smar_1256 pre-mRNA processing ribonucleoprotein, binding region (470 aa)
   
   
  0.853
rps8e
KEGG- tpe-Tpen_0358 ribosomal protein S8e (127 aa)
     
   
  0.852
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (16%) [HD]