STRINGSTRING
Nmar_1382 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1382" - PFAM: Protein of unknown function DUF655 in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1382PFAM- Protein of unknown function DUF655; KEGG- tac-Ta1299 putative nucleotide binding protein (188 aa)    
Predicted Functional Partners:
Nmar_1381
PFAM- ribosomal RNA adenine methylase transferase; KEGG- tpt-Tpet_1357 dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (234 aa)
         
  0.942
Nmar_1380
TIGRFAM- putative methylase; PFAM- methyltransferase small; KEGG- msi-Msm_1373 methyltransferase, HemK (178 aa)
 
          0.940
rpl21e
PFAM- Ribosomal protein L21e; KEGG- hbu-Hbut_1660 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family (99 aa)
 
     
  0.932
Nmar_1383
PFAM- RNA polymerase Rpb4; KEGG- tpe-Tpen_0352 RNA polymerase Rpb4 (108 aa)
         
  0.906
pus10
tRNA pseudouridine synthase Pus10; Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs (381 aa)
 
     
  0.761
rps3ae
PFAM- ribosomal protein S3Ae; KEGG- smr-Smar_0844 ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family (203 aa)
 
          0.684
dnaG
DNA primase DnaG; SMART- Toprim sub domain protein; KEGG- sso-SSO0079 Bacterial-like DNA primase (380 aa)
   
     
  0.676
cca
CCA-adding enzyme; Catalyzes the addition and repair of the essential 3’- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate (443 aa)
   
     
  0.673
Nmar_1301
PFAM- protein of unknown function DUF120; KEGG- hwa-HQ3236A conserved riboflavin biosynthetic operon protein; probable transtriptional regulator (227 aa)
   
     
  0.650
tiaS
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA (450 aa)
   
     
  0.650
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (11%) [HD]