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Nmar_1388 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1388" - PFAM: Radical SAM domain protein in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_1388PFAM- Radical SAM domain protein; KEGG- tko-TK0167 hypothetical protein (574 aa)    
Predicted Functional Partners:
Nmar_1387
annotation not available (60 aa)
              0.716
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate (303 aa)
         
  0.691
Nmar_1389
PFAM- oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG- rci-LRC391 predicted dihydroorotate dehydrogenase, electron transfer subunit (270 aa)
              0.686
Nmar_0299
PFAM- ribulose-phosphate 3-epimerase; Transketolase domain protein; KEGG- pth-PTH_2750 transketolase, N-terminal subunit (555 aa)
 
          0.656
Nmar_1382
PFAM- Protein of unknown function DUF655; KEGG- tac-Ta1299 putative nucleotide binding protein (188 aa)
 
          0.585
Nmar_1544
PFAM- Rieske [2Fe-2S] domain protein; KEGG- mse-Msed_1191 Rieske (2Fe-2S) domain protein (201 aa)
   
          0.531
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (388 aa)
              0.528
amoC
KEGG- net-Neut_1520 ammonia monooxygenase/methane monooxygenase, subunit C (190 aa)
   
          0.519
albA
DNA/RNA-binding protein Alba; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family (95 aa)
   
          0.518
flpA
Fibrillarin-like rRNA/tRNA 2’-O-methyltransferase; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2’-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (224 aa)
   
        0.508
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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