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Nmar_1396 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1396" - Uncharacterized protein in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1396Uncharacterized protein; KEGG- tva-TVAG_031940 erythrocyte binding protein, putative Pfam- Cgr1 UVR DUF1388 PROSITE- GLU_RICH LYS_RICH (291 aa)    
Predicted Functional Partners:
rlmE
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (197 aa)
              0.908
Nmar_1397
annotation not available (158 aa)
              0.685
Nmar_1781
RNA 2’,3’-cyclic phosphodiesterase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (180 aa)
     
      0.563
cca
CCA-adding enzyme; Catalyzes the addition and repair of the essential 3’- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate (443 aa)
              0.539
Nmar_0519
KEGG- iho-Igni_0768 signal recognition particle, subunit SRP19 (SRP19) (99 aa)
              0.539
Nmar_0518
annotation not available (82 aa)
              0.539
rps8e
KEGG- tpe-Tpen_0358 ribosomal protein S8e (127 aa)
              0.513
Nmar_0042
PFAM- protein of unknown function ATP binding; KEGG- sso-SSO1046 hypothetical protein (252 aa)
              0.504
Nmar_1398
KEGG- syn-slr1056 hypothetical protein (697 aa)
              0.492
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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