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top6B protein (Nitrosopumilus maritimus) - STRING interaction network
"top6B" - Type 2 DNA topoisomerase 6 subunit B in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
top6BType 2 DNA topoisomerase 6 subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity (626 aa)    
Predicted Functional Partners:
top6A
Type 2 DNA topoisomerase 6 subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family (370 aa)
 
 
  0.999
Nmar_1409
PFAM- KH type 1 domain protein; SMART- KH domain protein; KEGG- mka-MK0513 predicted RNA-binding protein containing KH domain) (190 aa)
 
          0.945
Nmar_1410
PFAM- protein of unknown function RIO1; KEGG- rci-LRC287 putative serine/threonine protein kinase (259 aa)
              0.922
Nmar_1309
PFAM- CoA-binding domain protein; ATP-grasp domain protein; KEGG- mem-Memar_2327 CoA-binding domain protein (705 aa)
       
      0.753
Nmar_0206
PFAM- CoA-binding domain protein; KEGG- rci-RCIX831 acetyl-CoA synthetase (ADP-forming), alpha and beta subunit fusion (698 aa)
       
      0.753
Nmar_1412
PFAM- Translation initiation factor IF2/IF5; KEGG- pab-PAB0959 translation initiation factor aIF-2 beta subunit (140 aa)
 
          0.723
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (388 aa)
     
   
  0.700
Nmar_1411
PFAM- Protein of unknown function DUF424; KEGG- pab-PAB1715 hypothetical protein (98 aa)
              0.666
Nmar_0236
KEGG- pfu-PF0264 histidyl-tRNA synthetase; TIGRFAM- histidyl-tRNA synthetase; PFAM- tRNA synthetase class II (G H P and S); Anticodon-binding domain protein (427 aa)
 
        0.604
Nmar_1627
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen (884 aa)
           
  0.575
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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