Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nmar_1418 | Nmar_1419 | Nmar_1418 | Nmar_1419 | TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mma:MM_2083 orotidine 5'-phosphate decarboxylase. | Hypothetical protein. | 0.974 |
Nmar_1418 | Nmar_1421 | Nmar_1418 | Nmar_1421 | TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mma:MM_2083 orotidine 5'-phosphate decarboxylase. | Hypothetical protein. | 0.467 |
Nmar_1418 | purA | Nmar_1418 | Nmar_1420 | TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mma:MM_2083 orotidine 5'-phosphate decarboxylase. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.854 |
Nmar_1419 | Nmar_1418 | Nmar_1419 | Nmar_1418 | Hypothetical protein. | TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mma:MM_2083 orotidine 5'-phosphate decarboxylase. | 0.974 |
Nmar_1419 | Nmar_1421 | Nmar_1419 | Nmar_1421 | Hypothetical protein. | Hypothetical protein. | 0.467 |
Nmar_1419 | purA | Nmar_1419 | Nmar_1420 | Hypothetical protein. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.729 |
Nmar_1421 | Nmar_1418 | Nmar_1421 | Nmar_1418 | Hypothetical protein. | TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mma:MM_2083 orotidine 5'-phosphate decarboxylase. | 0.467 |
Nmar_1421 | Nmar_1419 | Nmar_1421 | Nmar_1419 | Hypothetical protein. | Hypothetical protein. | 0.467 |
Nmar_1421 | purA | Nmar_1421 | Nmar_1420 | Hypothetical protein. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.676 |
purA | Nmar_1418 | Nmar_1420 | Nmar_1418 | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mma:MM_2083 orotidine 5'-phosphate decarboxylase. | 0.854 |
purA | Nmar_1419 | Nmar_1420 | Nmar_1419 | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | Hypothetical protein. | 0.729 |
purA | Nmar_1421 | Nmar_1420 | Nmar_1421 | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | Hypothetical protein. | 0.676 |