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Nmar_1451 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1451" - annotation not available in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1451annotation not available (102 aa)    
Predicted Functional Partners:
Nmar_1452
KEGG- tpe-Tpen_0300 hypothetical protein; Belongs to the PDCD5 family (134 aa)
              0.858
rtcB
tRNA-splicing ligase RtcB; PFAM- protein of unknown function UPF0027; KEGG- tko-TK0358 hypothetical protein; Belongs to the RtcB family (482 aa)
              0.857
Nmar_1454
annotation not available (79 aa)
              0.608
Nmar_1455
TIGRFAM- adenylosuccinate lyase; PFAM- fumarate lyase; KEGG- mja-MJ0929 adenylosuccinate lyase (453 aa)
              0.516
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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