STRINGSTRING
Nmar_1476 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1476" - KEGG: deb:DehaBAV1_1253 hypothetical protein in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1476KEGG- deb-DehaBAV1_1253 hypothetical protein (309 aa)    
Predicted Functional Partners:
Nmar_1475
KEGG- nmu-Nmul_A2224 hypothetical protein (660 aa)
              0.845
Nmar_1474
KEGG- nmu-Nmul_A2225 hypothetical protein (290 aa)
              0.845
Nmar_1473
TIGRFAM- DNA-cytosine methyltransferase; PFAM- C-5 cytosine-specific DNA methylase; KEGG- sun-SUN_2438 cytosine-specific methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (360 aa)
              0.606
Nmar_1472
annotation not available (821 aa)
              0.403
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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