STRINGSTRING
Nmar_1486 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1486" - PFAM: protein of unknown function DUF55 in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1486PFAM- protein of unknown function DUF55; KEGG- rca-Rcas_2368 protein of unknown function DUF55 (139 aa)    
Predicted Functional Partners:
Nmar_1485
PFAM- regulatory protein AsnC/Lrp family; KEGG- sai-Saci_0731 hypothetical protein (79 aa)
              0.703
Nmar_1484
annotation not available (188 aa)
              0.671
Nmar_1487
annotation not available (87 aa)
              0.472
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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