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Nmar_1516 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1516" - PFAM: von Willebrand factor type A in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1516PFAM- von Willebrand factor type A (520 aa)    
Predicted Functional Partners:
Nmar_1515
PFAM- ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART- AAA ATPase; KEGG- rde-RD1_1560 denitrification regulatory protein NirQ (264 aa)
   
   
  0.931
Nmar_1514
KEGG- iho-Igni_1108 geranylgeranyl reductase (485 aa)
              0.722
Nmar_1517
PFAM- Pyridoxal-5’-phosphate-dependent protein beta subunit; KEGG- cne-CNL05880 cysteine synthase (514 aa)
   
        0.639
Nmar_1518
PFAM- protein of unknown function DUF437; KEGG- mbu-Mbur_0418 hypothetical protein (151 aa)
              0.638
Nmar_1520
annotation not available (77 aa)
              0.493
Nmar_1519
TATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (187 aa)
              0.493
Nmar_1513
PFAM- Protein of unknown function DUF54; KEGG- mja-MJ0213 hypothetical protein (141 aa)
              0.413
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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