STRINGSTRING
Nmar_1521 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1521" - annotation not available in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1521annotation not available (193 aa)    
Predicted Functional Partners:
Nmar_1520
annotation not available (77 aa)
              0.625
Nmar_1519
TATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (187 aa)
              0.625
Nmar_1518
PFAM- protein of unknown function DUF437; KEGG- mbu-Mbur_0418 hypothetical protein (151 aa)
              0.483
Nmar_1517
PFAM- Pyridoxal-5’-phosphate-dependent protein beta subunit; KEGG- cne-CNL05880 cysteine synthase (514 aa)
              0.483
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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