STRINGSTRING
Nmar_1581 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1581" - KEGG: mbn:Mboo_1407 5-deoxyadenosylcobinamide phosphate nucleotidyltransferase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1581KEGG- mbn-Mboo_1407 5-deoxyadenosylcobinamide phosphate nucleotidyltransferase (194 aa)    
Predicted Functional Partners:
cobS
Adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate; Belongs to the CobS family (241 aa)
 
   
  0.996
cobD
Probable cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (323 aa)
       
  0.993
cobQ
Probable cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation (279 aa)
              0.922
Nmar_1585
PFAM- aminotransferase class I and II; KEGG- cbe-Cbei_1269 putative L-threonine-O-3-phosphate decarboxylase (359 aa)
         
  0.877
Nmar_0322
UPF0284 protein Nmar_0322; PFAM- Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG- afu-AF0276 hypothetical protein; Belongs to the UPF0284 family (353 aa)
 
          0.637
Nmar_1586
KEGG- mxa-MXAN_3050 aspartate-semialdehyde dehydrogenase; TIGRFAM- aspartate-semialdehyde dehydrogenase; PFAM- Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region (358 aa)
              0.611
Nmar_0863
PFAM- LOR/SDH bifunctional protein conserved domain protein; KEGG- rci-RRC246 hypothetical protein (407 aa)
 
          0.597
Nmar_1603
PFAM- PUA domain containing protein; KEGG- rci-RCIX415 putative archaeosine tRNA-ribosyltransferase (157 aa)
   
          0.577
Nmar_1233
UPF0218 protein Nmar_1233; PFAM- Protein of unknown function DUF359; KEGG- mbu-Mbur_2282 protein of unknown function DUF359; Belongs to the UPF0218 family (154 aa)
   
          0.562
Nmar_0078
TIGRFAM- cob(I)alamin adenosyltransferase; PFAM- ATP-corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG- pth-PTH_0071 ATP-corrinoid adenosyltransferase (176 aa)
              0.539
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (13%) [HD]