STRINGSTRING
Nmar_1600 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1600" - annotation not available in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1600annotation not available (220 aa)    
Predicted Functional Partners:
Nmar_1601
annotation not available (110 aa)
              0.789
Nmar_1603
PFAM- PUA domain containing protein; KEGG- rci-RCIX415 putative archaeosine tRNA-ribosyltransferase (157 aa)
              0.609
nac
Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome (113 aa)
              0.609
Nmar_0087
RecA/RadA recombinase-like protein; KEGG- tac-Ta1104 probable DNA repair protein Rad51 (RadA) (217 aa)
              0.539
tmk
PFAM- thymidylate kinase; KEGG- ehi-55.t00018 thymidylate kinase, putative (193 aa)
              0.504
Nmar_0053
PFAM- protein of unknown function DUF521; KEGG- mae-Maeo_1036 protein of unknown function DUF521 (384 aa)
              0.497
Nmar_1597
TIGRFAM- UbiD family decarboxylase; PFAM- Carboxylyase-related protein; KEGG- mth-MTH1394 hypothetical protein (443 aa)
              0.467
Nmar_0054
PFAM- protein of unknown function DUF126; KEGG- mst-Msp_0225 hypothetical protein (128 aa)
              0.451
Nmar_1604
Phosphate uptake regulator, PhoU; PFAM- SpoVT/AbrB domain protein; PhoU family protein; KEGG- mba-Mbar_A1765 hypothetical protein (348 aa)
              0.445
Nmar_1599
annotation not available (148 aa)
              0.412
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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