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nac protein (Nitrosopumilus maritimus) - STRING interaction network
"nac" - Nascent polypeptide-associated complex protein in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
nacNascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome (113 aa)    
Predicted Functional Partners:
rpl29
PFAM- ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family (68 aa)
     
 
  0.998
rpl30
PFAM- ribosomal protein L30; KEGG- smr-Smar_1040 ribosomal protein L30P (155 aa)
   
      0.987
rpl18e
KEGG- mae-Maeo_1097 ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL18 family (115 aa)
   
      0.962
Nmar_1603
PFAM- PUA domain containing protein; KEGG- rci-RCIX415 putative archaeosine tRNA-ribosyltransferase (157 aa)
 
          0.960
rpl13
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (154 aa)
     
      0.953
Nmar_0391
PFAM- Ribosomal protein L32e; KEGG- pai-PAE2099 ribosomal protein L32 (134 aa)
   
      0.942
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (151 aa)
   
        0.941
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (251 aa)
   
      0.938
Nmar_1254
PFAM- Ribosomal protein L15e; KEGG- smr-Smar_0852 ribosomal protein L15e (154 aa)
 
        0.937
rpl21e
PFAM- Ribosomal protein L21e; KEGG- hbu-Hbut_1660 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family (99 aa)
   
        0.933
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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