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Nmar_1653 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1653" - PFAM: ABC-3 protein in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1653PFAM- ABC-3 protein; KEGG- tdn-Tmden_2063 ABC-3 (272 aa)    
Predicted Functional Partners:
Nmar_1654
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- bcz-BCZK4031 cation ABC transporter, ATP-binding protein (240 aa)
  0.990
Nmar_1655
PFAM- periplasmic solute binding protein; KEGG- bsu-BG12763 zinc transport system substrate-binding protein (306 aa)
 
  0.990
Nmar_1128
PFAM- periplasmic solute binding protein; KEGG- dsy-DSY0103 hypothetical protein (296 aa)
 
  0.948
Nmar_0328
PFAM- periplasmic solute binding protein; KEGG- rca-Rcas_1724 periplasmic solute binding protein (323 aa)
   
  0.782
Nmar_1656
Putative transcriptional regulator, CopG family; PFAM- CopG domain protein DNA-binding domain protein; KEGG- mth-MTH603 putative nickel responsive regulator 1 (127 aa)
              0.638
Nmar_0329
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- rrs-RoseRS_3069 ABC transporter related (256 aa)
 
 
  0.538
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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