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Nmar_1716 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1716" - PFAM: NUDIX hydrolase in Nitrosopumilus maritimus
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_1716PFAM- NUDIX hydrolase; KEGG- bay-RBAM_021740 NudF (171 aa)    
Predicted Functional Partners:
Nmar_1774
KEGG- smr-Smar_1238 ribose-phosphate pyrophosphokinase; TIGRFAM- ribose-phosphate pyrophosphokinase; PFAM- phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family (292 aa)
   
  0.925
Nmar_0224
PFAM- phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG- pto-PTO1166 phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family (449 aa)
     
  0.912
Nmar_1715
SMART- regulatory protein AsnC/Lrp family; KEGG- rci-RCIX1006 putative transcription regulator (AsnC/Lrp family) (300 aa)
              0.761
prf1
Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (426 aa)
   
      0.706
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (199 aa)
 
      0.661
rpl1
50S ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release (220 aa)
   
      0.542
Nmar_1714
PFAM- protein of unknown function DUF214; KEGG- mba-Mbar_A3445 hypothetical protein (395 aa)
              0.536
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (237 aa)
              0.518
Nmar_1469
KEGG- tac-Ta0950 hypothetical protein (272 aa)
              0.515
nfo
Probable endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5’-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin (279 aa)
   
   
  0.511
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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