STRINGSTRING
Nmar_1730 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1730" - Peptidyl-prolyl cis-trans isomerase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1730Peptidyl-prolyl cis-trans isomerase; PFAM- peptidylprolyl isomerase FKBP-type; KEGG- iho-Igni_0058 peptidylprolyl isomerase, FKBP-type (248 aa)    
Predicted Functional Partners:
Nmar_1732
KEGG- pab-PAB1318 nicotinamide-nucleotide adenylyltransferase; TIGRFAM- cytidyltransferase-related domain; PFAM- cytidylyltransferase (164 aa)
 
          0.782
Nmar_1731
Serine--pyruvate transaminase; PFAM- aminotransferase class V; KEGG- mvn-Mevan_1378 serine--pyruvate transaminase (381 aa)
              0.741
rtcA
RNA 3’-terminal phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (338 aa)
 
          0.644
rps17e
KEGG- msi-Msm_0833 ribosomal protein S17a; Belongs to the eukaryotic ribosomal protein eS17 family (129 aa)
              0.539
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family (412 aa)
   
        0.497
rpl37e
50S ribosomal protein L37e; Binds to the 23S rRNA (55 aa)
 
          0.494
Nmar_1719
PFAM- Protein of unknown function DUF137; KEGG- smr-Smar_1379 protein of unknown function DUF137 (254 aa)
   
          0.480
Nmar_0960
KEGG- pas-Pars_0405 nicotinamide-nucleotide adenylyltransferase; TIGRFAM- cytidyltransferase-related domain; PFAM- cytidylyltransferase; Citrate lyase ligase domain protein (176 aa)
 
          0.475
Nmar_1718
PFAM- GHMP kinase; KEGG- msi-Msm_0060 predicted kinase (GHMP kinase family) (303 aa)
   
          0.444
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (244 aa)
   
        0.441
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (10%) [HD]