STRINGSTRING
Nmar_1758 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1758" - annotation not available in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1758annotation not available (178 aa)    
Predicted Functional Partners:
Nmar_1757
annotation not available (92 aa)
              0.633
Nmar_1756
PFAM- Transcription factor TFIIS; SMART- DNA-directed RNA polymerase, M15 kDa subunit; KEGG- mja-MJ1148 DNA-directed RNA polymerase subunit M; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family (105 aa)
              0.627
pcn
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (248 aa)
              0.540
Nmar_1754
Aspartokinase; KEGG- mka-MK0109 aspartokinase; TIGRFAM- aspartate kinase; aspartate kinase, monofunctional class; PFAM- aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family (467 aa)
              0.475
Nmar_1759
annotation not available (48 aa)
              0.472
Nmar_1753
KEGG- hch-HCH_03037 hypothetical protein (488 aa)
              0.420
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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