STRINGSTRING
Nmar_1763 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1763" - PFAM: aminotransferase class V in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1763PFAM- aminotransferase class V; KEGG- mth-MTH1389 putative cysteine desulfurase (381 aa)    
Predicted Functional Partners:
Nmar_0672
TIGRFAM- thioredoxin reductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- tfu-Tfu_3108 thioredoxin reductase (334 aa)
       
  0.907
Nmar_0497
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (414 aa)
   
   
 
0.829
Nmar_1548
PFAM- UBA/THIF-type NAD/FAD binding protein; thiamineS protein; MoeZ/MoeB domain protein; KEGG- wsu-WS1006 molybdopterin biosynthesis protein MoeB (443 aa)
         
  0.809
Nmar_0516
KEGG- rxy-Rxyl_0171 FeS assembly ATPase SufC; TIGRFAM- FeS assembly ATPase SufC; PFAM- ABC transporter related; SMART- AAA ATPase (256 aa)
 
 
  0.687
Nmar_0496
TIGRFAM- FeS assembly protein SufD; PFAM- SufBD protein; KEGG- sae-NWMN_0789 FeS assembly protein SufB (466 aa)
 
  0.659
Nmar_0495
TIGRFAM- FeS assembly protein SufB; PFAM- SufBD protein; KEGG- rxy-Rxyl_0170 FeS assembly protein SufB (466 aa)
 
 
  0.650
Nmar_1764
annotation not available (198 aa)
              0.627
Nmar_0498
TIGRFAM- SUF system FeS assembly protein, NifU family; PFAM- nitrogen-fixing NifU domain protein; KEGG- rrs-RoseRS_0711 SUF system FeS assembly protein, NifU family (147 aa)
 
 
  0.623
Nmar_1765
PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein (99 aa)
              0.432
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (12%) [HD]