STRINGSTRING
Nmar_1773 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1773" - PFAM: MscS Mechanosensitive ion channel in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1773PFAM- MscS Mechanosensitive ion channel; KEGG- sco-SCO7001 integral membrane protein (547 aa)    
Predicted Functional Partners:
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA; Belongs to the RNase Z family (299 aa)
   
        0.730
cobB
NAD-dependent protein deacylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba’s DNA binding affinity, thereby repressing transcription (242 aa)
   
   
  0.728
Nmar_1774
KEGG- smr-Smar_1238 ribose-phosphate pyrophosphokinase; TIGRFAM- ribose-phosphate pyrophosphokinase; PFAM- phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family (292 aa)
   
        0.718
Nmar_1775
PFAM- putative RNA methylase; DNA methylase N-4/N-6 domain protein; KEGG- mmp-MMP0149 putative methyltransferase (315 aa)
              0.710
Nmar_1772
KEGG- mbu-Mbur_0186 lysine 2,3-aminomutase related protein (448 aa)
              0.504
Nmar_0962
KEGG- hma-pNG7298 hypothetical protein (250 aa)
   
          0.454
Nmar_1398
KEGG- syn-slr1056 hypothetical protein (697 aa)
   
          0.434
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (11%) [HD]