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Nmar_1775 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1775" - PFAM: putative RNA methylase in Nitrosopumilus maritimus
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
Nmar_1775PFAM- putative RNA methylase; DNA methylase N-4/N-6 domain protein; KEGG- mmp-MMP0149 putative methyltransferase (315 aa)    
Predicted Functional Partners:
Nmar_1774
KEGG- smr-Smar_1238 ribose-phosphate pyrophosphokinase; TIGRFAM- ribose-phosphate pyrophosphokinase; PFAM- phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family (292 aa)
   
        0.930
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA; Belongs to the RNase Z family (299 aa)
   
   
  0.926
cobB
NAD-dependent protein deacylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba’s DNA binding affinity, thereby repressing transcription (242 aa)
   
        0.848
Nmar_1394
PFAM- N2N2-dimethylguanosine tRNA methyltransferase; KEGG- msi-Msm_1031 N2,N2-dimethylguanosine tRNA methyltransferase, Trm1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family (382 aa)
     
 
  0.846
Nmar_0690
PFAM- tRNA methyltransferase complex GCD14 subunit; KEGG- smr-Smar_0877 methyltransferase type 11 (293 aa)
     
 
  0.789
rlmE
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (197 aa)
     
   
  0.751
Nmar_1773
PFAM- MscS Mechanosensitive ion channel; KEGG- sco-SCO7001 integral membrane protein (547 aa)
              0.710
rtcA
RNA 3’-terminal phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (338 aa)
   
        0.640
Nmar_1381
PFAM- ribosomal RNA adenine methylase transferase; KEGG- tpt-Tpet_1357 dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (234 aa)
     
   
  0.543
Nmar_1415
PFAM- Protein of unknown function DUF373; KEGG- pho-PH1903 hypothetical protein (381 aa)
              0.539
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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