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Nmar_1789 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1789" - KEGG: pho:PH0666 hypothetical protein in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1789KEGG- pho-PH0666 hypothetical protein (185 aa)    
Predicted Functional Partners:
priS
DNA primase small subunit PriS; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthe [...] (373 aa)
         
  0.795
Nmar_1788
annotation not available (94 aa)
              0.768
Nmar_1509
PFAM- phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG- mbu-Mbur_1505 phosphoesterase, RecJ-like protein (473 aa)
       
 
  0.736
pcn
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (248 aa)
         
  0.650
Nmar_1790
TIGRFAM- glutamine synthetase, type I; PFAM- glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG- mse-Msed_1612 glutamine synthetase, type I (490 aa)
              0.624
Nmar_0241
annotation not available (172 aa)
       
 
  0.549
Nmar_1756
PFAM- Transcription factor TFIIS; SMART- DNA-directed RNA polymerase, M15 kDa subunit; KEGG- mja-MJ1148 DNA-directed RNA polymerase subunit M; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family (105 aa)
              0.539
rps27e
PFAM- Ribosomal protein S27E; KEGG- pis-Pisl_0434 ribosomal protein S27E (65 aa)
              0.539
rpl44e
50S ribosomal protein L44e; Binds to the 23S rRNA (93 aa)
              0.539
Nmar_0725
KEGG- mka-MK0421 uncharacterized enzyme of the ATP-grasp superfamily (226 aa)
              0.539
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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