STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mccc2Methylcrotonoyl-CoA carboxylase 2 (beta). (530 aa)    
Predicted Functional Partners:
mccc1
Methylcrotonoyl-CoA carboxylase 1 (alpha).
 
 0.987
pcca
Propionyl-CoA carboxylase subunit alpha.
 
 0.977
nelfcd
Negative elongation factor complex member C/D.
  
 0.930
ivd
Isovaleryl-CoA dehydrogenase.
 
 
 0.909
pc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.885
hmgcll1
3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1.
 0.844
hlcs
Holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase).
  
 
 0.823
bckdha
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 
 0.822
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
 
 0.812
LOC109954824
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.804
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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