ENSMALP00000023630 protein (Monopterus albus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSMALP00000023630

COBW domain containing. (232 aa)

Predicted Functional Partners:

ENSMALP00000023565

0.840

metap1

0.779

mrpl33

0.729

RPS29

0.698

rsad1

0.696

mrps14

0.696

kti12

0.684

ENSMALP00000003978

0.530

eprs1

0.525

iyd

0.513

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000003978	ENSMALP00000023565	ENSMALP00000003978	ENSMALP00000023565	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	CobW C-terminal domain-containing protein.	0.530
ENSMALP00000003978	ENSMALP00000023630	ENSMALP00000003978	ENSMALP00000023630	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	COBW domain containing.	0.530
ENSMALP00000003978	RPS29	ENSMALP00000003978	ENSMALP00000024343	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein S29.	0.980
ENSMALP00000003978	metap1	ENSMALP00000003978	ENSMALP00000013608	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.720
ENSMALP00000003978	mrpl33	ENSMALP00000003978	ENSMALP00000006592	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L33.	0.999
ENSMALP00000003978	mrps14	ENSMALP00000003978	ENSMALP00000024498	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein S14.	0.999
ENSMALP00000003978	rsad1	ENSMALP00000003978	ENSMALP00000001624	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.980
ENSMALP00000023565	ENSMALP00000003978	ENSMALP00000023565	ENSMALP00000003978	CobW C-terminal domain-containing protein.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.530
ENSMALP00000023565	ENSMALP00000023630	ENSMALP00000023565	ENSMALP00000023630	CobW C-terminal domain-containing protein.	COBW domain containing.	0.840
ENSMALP00000023565	RPS29	ENSMALP00000023565	ENSMALP00000024343	CobW C-terminal domain-containing protein.	Ribosomal protein S29.	0.698
ENSMALP00000023565	eprs1	ENSMALP00000023565	ENSMALP00000021058	CobW C-terminal domain-containing protein.	Glutamyl-prolyl-tRNA synthetase.	0.525
ENSMALP00000023565	iyd	ENSMALP00000023565	ENSMALP00000023039	CobW C-terminal domain-containing protein.	Iodotyrosine deiodinase.	0.513
ENSMALP00000023565	metap1	ENSMALP00000023565	ENSMALP00000013608	CobW C-terminal domain-containing protein.	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.779
ENSMALP00000023565	mrpl33	ENSMALP00000023565	ENSMALP00000006592	CobW C-terminal domain-containing protein.	Mitochondrial ribosomal protein L33.	0.729
ENSMALP00000023565	mrps14	ENSMALP00000023565	ENSMALP00000024498	CobW C-terminal domain-containing protein.	Mitochondrial ribosomal protein S14.	0.696
ENSMALP00000023565	rsad1	ENSMALP00000023565	ENSMALP00000001624	CobW C-terminal domain-containing protein.	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.696
ENSMALP00000023630	ENSMALP00000003978	ENSMALP00000023630	ENSMALP00000003978	COBW domain containing.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.530
ENSMALP00000023630	ENSMALP00000023565	ENSMALP00000023630	ENSMALP00000023565	COBW domain containing.	CobW C-terminal domain-containing protein.	0.840
ENSMALP00000023630	RPS29	ENSMALP00000023630	ENSMALP00000024343	COBW domain containing.	Ribosomal protein S29.	0.698
ENSMALP00000023630	eprs1	ENSMALP00000023630	ENSMALP00000021058	COBW domain containing.	Glutamyl-prolyl-tRNA synthetase.	0.525