STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109965934Dedicator of cytokinesis 6; Belongs to the DOCK family. (1984 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.877
LOC109971977
Cell division cycle 42.
   
 0.753
LOC109968874
Uncharacterized protein.
   
 0.682
LOC109966191
Uncharacterized protein.
   
 0.682
lpcat3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
 
      0.608
LOC109966668
Rac family small GTPase 3b.
   
 0.555
LOC109975044
Rac family small GTPase 2.
   
 0.555
RAC1
Rac family small GTPase 1.
   
 0.555
LOC109971550
Uncharacterized protein.
   
 0.555
LOC109959052
Macrophage stimulating 1 receptor a.
   
 
 0.538
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.