STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0356Putative PAS protein. (131 aa)    
Predicted Functional Partners:
AZC_1421
PAS/PAC sensor hybrid histidine kinase.
 
0.808
AZC_3098
Putative ATPase.
 
 
 0.749
AZC_4096
Unknown function protein; With GGDEF motif, DUF1.
  
 
 0.708
AZC_3923
Response regulator receiver; ATP-binding region, histidine kinase A, N-terminal precursor.
  
 
 0.696
ntrB
Signal transduction histidine kinase; NtrB/NtrY.
 
 
 0.681
AZC_1360
Sensor protein.
 
 
 0.680
AZC_4679
Proble transcriptional regulator.
 
  
 0.658
AZC_3122
PAS protein.
  
 
 0.649
AZC_4658
Conserved putative membrane protein.
  
 
 0.619
AZC_1166
Sensor protein.
 
 
 0.612
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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