Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AZC_0109 | AZC_0115 | AZC_0109 | AZC_0115 | Helicase; C-terminal:DEAD/DEAH box helicase, N-terminal. | Metallophosphoesterase. | 0.916 |
AZC_0109 | AZC_0393 | AZC_0109 | AZC_0393 | Helicase; C-terminal:DEAD/DEAH box helicase, N-terminal. | Putative ATP dependent DNA ligase. | 0.808 |
AZC_0109 | AZC_0394 | AZC_0109 | AZC_0394 | Helicase; C-terminal:DEAD/DEAH box helicase, N-terminal. | Hypothetical protein. | 0.810 |
AZC_0115 | AZC_0109 | AZC_0115 | AZC_0109 | Metallophosphoesterase. | Helicase; C-terminal:DEAD/DEAH box helicase, N-terminal. | 0.916 |
AZC_0115 | AZC_0393 | AZC_0115 | AZC_0393 | Metallophosphoesterase. | Putative ATP dependent DNA ligase. | 0.829 |
AZC_0115 | AZC_0394 | AZC_0115 | AZC_0394 | Metallophosphoesterase. | Hypothetical protein. | 0.802 |
AZC_0393 | AZC_0109 | AZC_0393 | AZC_0109 | Putative ATP dependent DNA ligase. | Helicase; C-terminal:DEAD/DEAH box helicase, N-terminal. | 0.808 |
AZC_0393 | AZC_0115 | AZC_0393 | AZC_0115 | Putative ATP dependent DNA ligase. | Metallophosphoesterase. | 0.829 |
AZC_0393 | AZC_0394 | AZC_0393 | AZC_0394 | Putative ATP dependent DNA ligase. | Hypothetical protein. | 0.994 |
AZC_0393 | AZC_1013 | AZC_0393 | AZC_1013 | Putative ATP dependent DNA ligase. | DNA polymerase III beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.957 |
AZC_0393 | AZC_2003 | AZC_0393 | AZC_2003 | Putative ATP dependent DNA ligase. | Peptidase S26A; Belongs to the peptidase S26 family. | 0.619 |
AZC_0393 | AZC_2174 | AZC_0393 | AZC_2174 | Putative ATP dependent DNA ligase. | Putative DNA polymerase III delta prime subunit. | 0.727 |
AZC_0393 | AZC_2284 | AZC_0393 | AZC_2284 | Putative ATP dependent DNA ligase. | Topoisomerase IB. | 0.687 |
AZC_0393 | AZC_3592 | AZC_0393 | AZC_3592 | Putative ATP dependent DNA ligase. | Putative phage exonuclease. | 0.675 |
AZC_0393 | ligA | AZC_0393 | AZC_0149 | Putative ATP dependent DNA ligase. | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.919 |
AZC_0393 | polA | AZC_0393 | AZC_4464 | Putative ATP dependent DNA ligase. | DNA polymerase A; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.881 |
AZC_0394 | AZC_0109 | AZC_0394 | AZC_0109 | Hypothetical protein. | Helicase; C-terminal:DEAD/DEAH box helicase, N-terminal. | 0.810 |
AZC_0394 | AZC_0115 | AZC_0394 | AZC_0115 | Hypothetical protein. | Metallophosphoesterase. | 0.802 |
AZC_0394 | AZC_0393 | AZC_0394 | AZC_0393 | Hypothetical protein. | Putative ATP dependent DNA ligase. | 0.994 |
AZC_0394 | AZC_2284 | AZC_0394 | AZC_2284 | Hypothetical protein. | Topoisomerase IB. | 0.553 |
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