STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0589Putative ABC transport protein; Substrate-binding component. (423 aa)    
Predicted Functional Partners:
AZC_4515
Putative ABC transporter, permease protein precursor; Belongs to the binding-protein-dependent transport system permease family.
 
    0.844
AZC_4511
ABC-type branched-chain amino acid transport ATPase component.
 
    0.838
AZC_4514
Putative branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.838
AZC_4512
ABC-type branched-chain amino acid transport ATPase component.
 
    0.805
AZC_0590
Putative gluconolactonase.
       0.773
AZC_2793
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.667
AZC_1886
Putative branched-chain amino acid transport system protein 1; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.616
AZC_0588
Conserved hypothetical membrane protein.
       0.490
AZC_0591
Prokaryotic protein of unknown function; DUF849.
       0.421
AZC_1438
Branched-chain amino acid uptake ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.406
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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