STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0852Putative lytic transglycolase. (265 aa)    
Predicted Functional Partners:
AZC_0853
Microcystin-dependent protein.
  
  
 0.777
AZC_0854
Unknown protein.
       0.762
AZC_0855
Conserved hypothetical protein; Virulence factor, pectin lyase fold.
       0.557
fliI
Flagellum-specific ATP synthase.
  
  
 0.510
fliE
Flagellar hook-basal body complex protein.
  
  
 0.506
fliM
Flagellar motor switch protein; Surface presentation of antigens (SPOA) protein.
  
    0.442
AZC_0856
Hypothetical protein.
       0.431
AZC_0857
Putative chitinase.
     
 0.403
flgB
Flagellar basal-body rod protein.
  
  
 0.401
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.