Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AZC_0031 | pdxH | AZC_0031 | AZC_1197 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.511 |
AZC_0031 | pdxJ | AZC_0031 | AZC_2001 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Pyridoxal phosphate biosynthetic protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.544 |
AZC_0031 | ribB | AZC_0031 | AZC_3102 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.489 |
AZC_1064 | AZC_1389 | AZC_1064 | AZC_1389 | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | Aldo/keto reductase. | 0.902 |
AZC_1064 | AZC_1605 | AZC_1064 | AZC_1605 | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | Putative oxidoreductase. | 0.902 |
AZC_1064 | pdxH | AZC_1064 | AZC_1197 | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.947 |
AZC_1064 | pdxJ | AZC_1064 | AZC_2001 | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | Pyridoxal phosphate biosynthetic protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.905 |
AZC_1196 | AZC_1198 | AZC_1196 | AZC_1198 | Short-chain dehydrogenase; Reductase SDR. | Hypothetical protein. | 0.495 |
AZC_1196 | pdxH | AZC_1196 | AZC_1197 | Short-chain dehydrogenase; Reductase SDR. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.709 |
AZC_1198 | AZC_1196 | AZC_1198 | AZC_1196 | Hypothetical protein. | Short-chain dehydrogenase; Reductase SDR. | 0.495 |
AZC_1198 | pdxH | AZC_1198 | AZC_1197 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.594 |
AZC_1389 | AZC_1064 | AZC_1389 | AZC_1064 | Aldo/keto reductase. | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | 0.902 |
AZC_1389 | AZC_1605 | AZC_1389 | AZC_1605 | Aldo/keto reductase. | Putative oxidoreductase. | 0.910 |
AZC_1389 | pdxH | AZC_1389 | AZC_1197 | Aldo/keto reductase. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.900 |
AZC_1605 | AZC_1064 | AZC_1605 | AZC_1064 | Putative oxidoreductase. | Pyridoxal kinase; Belongs to the pyridoxine kinase family. | 0.902 |
AZC_1605 | AZC_1389 | AZC_1605 | AZC_1389 | Putative oxidoreductase. | Aldo/keto reductase. | 0.910 |
AZC_1605 | pdxH | AZC_1605 | AZC_1197 | Putative oxidoreductase. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.900 |
carB | pdxH | AZC_1145 | AZC_1197 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.618 |
carB | pyrB | AZC_1145 | AZC_2851 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
pdxH | AZC_0031 | AZC_1197 | AZC_0031 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.511 |
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