STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1553Putative oligopeptide ABC transporter permease component. (317 aa)    
Predicted Functional Partners:
AZC_1552
ABC transporter permease protein.
    0.963
AZC_1551
Oligopeptide/dipeptide ABC transporter; ATP-binding protein, C-terminal; Belongs to the ABC transporter superfamily.
  
 0.925
AZC_1549
Oligopeptide/dipeptide ABC transporter; ATP-binding protein, C-terminal; Belongs to the ABC transporter superfamily.
   0.846
AZC_2628
ABC transporter permease protein.
    0.843
AZC_1554
ABC transporter substrate binding protein.
 
   0.824
AZC_2625
ABC transporter substrate binding protein.
 
   0.823
AZC_2626
ABC transporter substrate binding protein.
 
   0.823
AZC_0023
Putative oligopeptide ABC transporter; Periplasmic binding protein component precursor.
   0.820
AZC_0774
ABC transporter permease protein.
    0.820
AZC_1957
ABC transporter permease protein 1.
    0.812
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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