STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mipA-2Conserved hypothetical protein; MltA-interacting. (285 aa)    
Predicted Functional Partners:
AZC_0350
Conserved hypothetical protein; Xylose isomerase-like TIM barrel.
  
     0.516
AZC_1662
Putative glycine/D-amino acid oxidase.
       0.510
dksA
Zn-finger protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
  
    0.480
AZC_4164
Conserved hypothetical protein; Carbohydrate-binding family V/XII.
  
     0.461
AZC_0568
Hypothetical protein.
  
     0.452
AZC_2216
ABC-type uncharacterized transport system protein; COG3218.
  
     0.446
flaF
Flagellar FlaF protein.
  
     0.421
AZC_1665
Hypothetical protein.
       0.421
AZC_3535
Putative outer membrane protein, putative porin precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.421
AZC_3379
Putative flagellin A protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
   
 0.403
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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