STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2117Hydantoin utilization protein A. (693 aa)    
Predicted Functional Partners:
AZC_2116
Hydantoin utilization protein B.
 0.999
AZC_1796
Putative N-methylhydantoinase B.
 0.998
AZC_2354
Hydantoinase B; Oxoprolinase.
 0.998
agaG
Putative AgaG protein; Similar to AgaG of Agrobacterium tumefaciens.
 0.998
AZC_2355
Hydantoinase/oxoprolinase.
  
  
 
0.918
AZC_1797
Putative 5-oxoprolinase.
  
  
 
0.913
agaF
Putative AgaF protein; Similar to AgaF of Agrobacterium tumefaciens.
  
  
 
0.910
AZC_2464
Hydrolase; Isochorismatase family.
    
  0.902
AZC_1945
Cytosine deaminase and related metal-dependent hydrolase.
     
  0.900
AZC_2118
Isochorismatase family protein.
 
     0.886
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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